Apache install -- how do I switch installs?

[Bradley Miller]

Ok, I have my Apache 1.3.9 installed and running, the problem is when I
configured the system for PHP and MySQL, it installed itself with a
different directory structure.  No big problem, I like the /www/htpdocs one
better than the /etc/httpd one.   The problem is, when my machine boots, it
references the /etc/httpd one instead of the new /www/htpdocs one.   In
other words, it's still running the first configured (via Redhat 6.1)
Apache server.  I've looked in linuxconf and tried to tweak things, but
it's not where I need to be I think.  I've checked the rc.d/init.d folder
in the /etc directory and nothing seems to help or give me a "aha" feeling.

Anyone else know anything that might help me re-configure this?

-- Bradley Miller